PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_194.18
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 354aa    MW: 36904.7 Da    PI: 6.749
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_194.18genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.33.3e-082332702663
                                   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                        bZIP_1  26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                   ae+eeL++kv+ L+aeN  Lk+e+ +l+++++kl+ e+
  evm.model.supercontig_194.18 233 AETEELARKVECLTAENVGLKSEIGQLTDKSDKLRREN 270
                                   799*******************************9886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.6E-36192IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.8E-21126221No hitNo description
Gene3DG3DSA:1.20.5.1703.5E-5233268No hitNo description
PfamPF001705.4E-7233270IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MGNSEEGKSS KSDKSSSPAP ADQTNIHVYP DWAAMQAYYS PRVPIPPYYN SAMPSGHPPH  60
PYMWGPQPMM PPYGAPYAAI YSHGGVYAHP AVSLGSHSQG HGVPLSPATA TPLSIETPTK  120
SSGITDRSLM KKLKGFDGLA MSIGNGNTDS AEGAGEHGLS KSIDTEGSSD GSDGSTSGVD  180
QTKRKRRHEG TPTAGGKNQG QSGSVPAGDP AYNKVLGTAG GPANIIGNAS GTAETEELAR  240
KVECLTAENV GLKSEIGQLT DKSDKLRREN VALMEKLKNA QLVRTEEMGL NNVDDKRAAP  300
VNTENLLSRV NNSGSHDRST EQEGEVYEKK SNSGAKLHQL LGASPRADAV AAG*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012083267.11e-128PREDICTED: common plant regulatory factor 1-like isoform X1
SwissprotP427761e-99GBF3_ARATH; G-box-binding factor 3
TrEMBLB9RE161e-146B9RE16_RICCO; Common plant regulatory factor CPRF-1, putative
STRINGPOPTR_0002s16870.11e-127(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35712661
Representative plantOGRP43461123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.23e-81G-box binding factor 3